Michael J. Behe recomends

Center for the Renewal of Science and Culture
Discovery Institute for information and articles about intelligent design.
http://www.crsc.org

Access Research Network a "non-profit organization dedicated to providing accessible information on science, technology and society" from an intelligent-design perspective.
http://www.arn.org

Intelligent Design Undergraduate Research Community
This intelligent design web site is a division of Access Research Network. It features articles, discussion, and educational information.
http://www.idurc.org

also see

Molecular machine animations showing the construction and function of Flagellae (Quicktime)
http://www.arn.org/mm/mm_movies.htm


William A. Dembski recomends

International Society for Complexity, Information, and Design (ISCID)
ISCID's "aim is to pursue the theoretical development, empirical application, and philosophical implications of information and design-theoretic concepts for complex systems."
http://www.iscid.org/

Articles by William A. Dembski
Many articles to choose from on the Discovery Institute site.
http://www.discovery.org/scripts/viewDB/index.php?command=view&id=32&isFellow=true

also see

Major paper on ID and it's evidence W Dembski
http://www.designinference.com/documents/2005.09.Expert_Report_Dembski.pdf

Links recommended by Jonathan Wells

Icons of Evolution
This site promotes the book Icons of Evolution by Jonathan Wells. You can read the book's intro online and go to articles by Wells.
http://www.iconsofevolution.com/

Discovery Institute: Articles by Jonathan Wells
Click on "articles by Jonathan Wells" on the author's bio page for more of his views on intelligent design.
http://www.discovery.org/scripts/viewDB/index.php?command=view&isFellow=true&id=41
"Inherit the Spin" article

Jonathan Wells critiques the National Center for Science Education's advice about teaching evolution.
http://www.discovery.org/viewDB/index.php3?program=CRSC20Responses&command=view&id=1106

also see

Intelligent Design and the myth of Academic Freedom
http://www.npr.org/templates/story/story.php?storyId=5007508 read or listen
and
http://www.rsternberg.net/

Paul Nelson examines an exciting movement that is shaping the evolution debate
http://www.cmf.org.uk/literature/content.asp?context=article&id=1303

Phillip Johnson on separating Science from materialistic assumptions
http://www.origins.org/mc/resources/ri9602/johnson.html

The Little Engine That Could...Undo Darwinism
http://www.spectator.org/dsp_article.asp?art_id=8543 (Dan Peterson)


ID Blogs
http://creationevolutiondesign.blogspot.com/ (Stephen Jones Perth Aust)

http://post-darwinist.blogspot.com/ (Denyse O'Leary)

http://www.uncommondescent.com/ (Bill Dembski)

http://www.telicthoughts.com/ (Mike Gene, etc)

http://www.idthefuture.com/ (Discovery Inst.)

http://www.evolutionnews.org/ (Discovery Inst.)

http://www.arn.org/blogs/ (Access Research Net.)

http://www.arn.org/blogs/index.php/2 (Denyse O'Leary)

http://idintheuk.blogspot.com/ (Andy Rowell)

http://www.newcreationism.org/DesignWatch.html (Kevin Miller)

http://darwinianfundamentalism.blogspot.com/ (Lawrence Selden)

http://wittingshire.blogspot.com/ (Jonathan & Amanda Witt)

http://teleological.org/WPblog/ (Salvador Cordova)

http://doubtingdarwin.blogspot.com/ (Samuel Chen)

http://www.christianity.ca/faith/features/weblog.html (Denyse O'Leary)

http://cruxmag.typepad.com/sci_phi/ (Denyse O'Leary, etc)